miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|110861368|gb|DY281983.1|DY281983 TTGTCAATGTGTCCCTAAATTCAATGTAAATGATGTTTTCTAGAATATGAAAATCAACCTGACCTTTAGTTCAGATCCTC
ACTCGGTTTTGTAGTATATGAATTTTCTATTTCTCTTGCAATTTTTGTTATGGATCTTTTGTGTCTGAATATAGTCATAA
ATAGTGATGATTTTGTATCACCAGAGTATTAAATTGTTACAAGTTCTCAATTAATGTATACCATGTGTTTGAATGATGGT
GAGACCTAAACTGGTGCAAATCATAGTCACATGATATAAATTTTGACCTTGTACTATGTAGCGTTATAACGTTCAATCAT
GGCGACGGAGGTGATGGATCTTCCTCGAAGAACTTGACATGTTTAAACGTTGCATTAAAGTTCTTTAAGATTTTCTTGAT
TTACATAAGACAAAGGATTTTAGTTAACTAGTTTTATGCTTTTAACTTTGGAGCAGTAATTACTAGGAAGTCTTTTCTGC
TGTTTTGTTGATAAACATTTTCTTGCACTTGGTTTTTACTACGTTCTTTTGAGTTTTGAGAAAGAGAAAAAATTTAGTGA
GTTGTTTATTCTGAGTGTGAAGTTAGATAAAGTTAATTACTTTGATTGATTAACTTCACAGAATGTTGCCTATTAATTTA
GACAGCCAATAACAATCAATGATTTATATTTTTGCTTGGTGCAGAAATAAGGGAATAAGTTTTGTTGCCATTGATCAGAA
CAGGCCACTGTCAGATCAAGGGCCTTTTGATGTTGTCTTGCACAAGTTGTCAGGAATGGAGTGGTGCGAGATCATTGAGG
ATTACAGGCAGAAACATCCAGAAGTTACCATCCTTGATCCACCAGATGCAATTAAACATCTACACAATCGACAGTCCATG
CTTCANGATGTGGCAGATCTTAACTTGTCTGACTGCAATGGCAAGGTTCGTGTTCCTANGC




Most similar to sp|O81893|ITPK3_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O81893|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3
           OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3
          Length = 391

 Score =  131 bits (329), Expect = 8e-30
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = +2

Query: 683 RNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHL 862
           R KGI FVAID NRPLS+QGPFDVVLHKL G EW E+IEDY+QKHPEVT+LDPP +I+ +
Sbjct: 105 RRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIEDYQQKHPEVTVLDPPGSIQRI 164

Query: 863 HNRQSMLXDVADLNLSDCNGKVRVP 937
           +NRQSML  +ADL LSDC+G + VP
Sbjct: 165 YNRQSMLQGMADLKLSDCSGSLFVP 189